7 Mistakes You're Making with Year-End Bookkeeping (and How to Fix Them Before Tax Season)
- Susan Hagen
- Dec 15, 2025
- 6 min read
December is here, which means it's time to face the music: year-end bookkeeping. I know, I know: it's about as exciting as watching paint dry. But here's the thing: the mistakes you make (or don't catch) right now will either make tax season a breeze or turn it into your personal nightmare.
After working with hundreds of small business owners over the years, I've seen the same mistakes pop up again and again. The good news? They're totally fixable if you tackle them now instead of waiting until January when your tax preparer is breathing down your neck.
Let's dive into the seven biggest year-end bookkeeping mistakes I see and exactly how to fix them before tax season hits.
Mistake #1: Skipping Account Reconciliations
The Problem
This is the big one, folks. I can't tell you how many business owners come to me in January with books that haven't been reconciled in months. Your bank account shows one thing, QuickBooks shows another, and somewhere in between is the actual truth about your finances.
When your records don't match your bank statements, you're basically flying blind. You might be missing income, overlooking expenses, or worse: reporting numbers that are completely wrong. Plus, good luck explaining those discrepancies to the IRS if they come knocking.
The Fix
Make reconciliation a non-negotiable monthly habit. I'm talking about matching every single transaction in your accounting software to your bank and credit card statements.
Start with November if you haven't done it yet, then tackle December as soon as your statement comes in. Use your accounting software's reconciliation feature: it'll walk you through the process step by step. If you're using QuickBooks, the reconciliation tool will flag any discrepancies and help you track them down.
Pro tip: Set a monthly reminder on your calendar for the 5th of each month to reconcile the previous month. Your future self will thank you.

Mistake #2: Waiting Until the Last Minute
The Problem
January rolls around and suddenly everyone remembers they need their books cleaned up for taxes. Your accountant is swamped, you're stressed, and everything feels urgent. When you're rushing, mistakes happen. You miss deductions, categorize things wrong, and end up paying more in taxes than you should.
I've seen business owners lose thousands in deductions simply because they didn't have time to properly organize their receipts and records.
The Fix
Start your year-end cleanup right now. Run your Profit & Loss and Balance Sheet reports to see what needs attention. Look for any transactions that seem out of place or categories that look way too high or too low.
Create a simple checklist of what needs to be done:
Reconcile all accounts through November (and December when available)
Review and categorize any uncategorized transactions
Gather missing receipts for large purchases
Check for any personal expenses that snuck into business accounts
Review payroll records for accuracy
Tackle one item each day, and you'll be done before Christmas instead of scrambling in January.
Mistake #3: Misclassifying Expenses and Income
The Problem
This one drives me absolutely crazy because it's so preventable. I'll see office supplies coded as "meals and entertainment" or contractor payments listed as "office expenses." These misclassifications mess up your financial reports and can cost you money in missed deductions.
For example, if you code a business meal as office supplies, you might deduct 100% instead of the allowed 50%. That's going to raise red flags with the IRS.
The Fix
Take a hard look at your chart of accounts and make sure you're using the right categories. Here are some common ones to double-check:
Meals and entertainment: Only 50% deductible, and they need to be business-related
Office supplies vs. equipment: Supplies are expensed immediately; equipment over $2,500 usually needs to be depreciated
Contract labor vs. employee wages: Different tax implications and reporting requirements
Personal vs. business vehicle expenses: Keep these separate to avoid headaches
If you're unsure about something, don't guess. Ask your accountant or do a quick Google search. It's better to spend five minutes getting it right than dealing with problems later.
Mistake #4: Forgetting Adjusting Entries
The Problem
Adjusting entries might sound boring, but they're crucial for accurate books. These include things like prepaid insurance, accrued expenses, depreciation, and inventory adjustments. Skip them, and your financial statements will be off.
For instance, if you paid for a year of insurance in January but haven't been recording the monthly expense, your books are showing the wrong profit for most of the year.
The Fix
Review your balance sheet for prepaid expenses and accrued liabilities. Common adjusting entries include:
Prepaid expenses: Insurance, rent paid in advance, annual software subscriptions
Accrued expenses: Unpaid bills for December services, accrued payroll
Depreciation: Equipment, vehicles, major purchases from previous years
Inventory adjustments: If you track inventory, make sure counts are accurate
If this feels overwhelming, focus on the big-ticket items first. A $5,000 insurance prepayment is more important to adjust than a $50 office supply purchase.

Mistake #5: Mixing Personal and Business Expenses
The Problem
I get it: sometimes you're out and about and use your business card for personal stuff, or you pay for business expenses with your personal card. But if you don't clean this up by year-end, it creates a mess for tax purposes.
The IRS doesn't like seeing personal expenses on business returns, and you definitely don't want to miss out on legitimate business deductions because they were paid from your personal account.
The Fix
Go through your transactions and identify anything personal that was charged to the business or business expenses paid personally. For personal charges on business accounts, code them as "Owner's Draw" or "Distributions" depending on your business structure.
For business expenses paid personally, you can either:
Record them as business expenses and show money owed to you
Reimburse yourself and record the reimbursement
Consider it a capital contribution if you don't want reimbursement
The key is being consistent with whichever method you choose.
Mistake #6: Manual Data Entry Errors
The Problem
Typing numbers all day leads to typos. A misplaced decimal point can throw off your entire financial picture. I've seen $500 become $5,000 or $50, dramatically changing profit calculations and tax liability.
These errors compound over time and can create major headaches when you're trying to figure out why your books don't balance.
The Fix
First, minimize manual entry by connecting your bank accounts to your accounting software. Most modern accounting platforms can automatically import transactions, reducing typing errors significantly.
For transactions you do need to enter manually, always double-check the numbers. If something seems unusually high or low, investigate it immediately rather than assuming it's correct.
Consider using receipt scanning apps like Receipt Bank or Expensify that use OCR technology to automatically capture amounts and vendor information.
Mistake #7: Overlooking Tax Obligations and Credits
The Problem
Tax laws change constantly, and it's easy to miss new deductions or credits you qualify for. On the flip side, you might be claiming deductions you're not entitled to, which can trigger audits or penalties.
Many small business owners also underestimate their quarterly tax payments throughout the year, leading to surprise tax bills in April.
The Fix
Schedule a year-end planning session with your accountant before December 31st. They can help you identify:
Last-minute deductions you can take (like equipment purchases)
Tax credits you might qualify for (R&D credit, work opportunity tax credit, etc.)
Income timing strategies to minimize your tax burden
Retirement contributions that reduce taxable income
If you haven't been making quarterly payments, calculate what you'll owe and set aside money now. It's better to be prepared than scrambling to pay a huge tax bill in April.
Take Action Now
Here's the bottom line: these mistakes are completely avoidable if you address them before January. Pick one or two that resonate with your situation and tackle them this week. Then move on to the others.
Remember, clean books aren't just about tax compliance: they give you the accurate financial picture you need to make smart business decisions. And trust me, your accountant will love you for bringing them organized, accurate records instead of a shoebox full of receipts.
Need help getting your books in shape for tax season? Don't let these common mistakes cost you time and money. The sooner you address them, the smoother your tax season will be.
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